Transcript | PlantGenIE.org

Legend: 5'UTR CDS 3'UTR

Genomic Sequence (- strand) upstream: downstream:

>Chr3:3864152-3866596[2445 nucleotides] 
AAGAGGAAAATCTCATCTTTTTCCCTCGACGACAACCACCTTAGGGTTAGGTTTATTTTCTCGCTTATTCTCTCTAACTCTTTTTCCCTATTCCGATTTCGATTTGTCTTCTCCGATTCGCTTTTCCTTTCGCTCTCTAGACTCTAGAGTCAATTTGATTTCTACTCTCGTATCGGATCTATACTTAATCATGGATACTCGTAAGAGAGGACGGCCTGAAGCTGGCTCATTCAACTCCAATGGCGGCGGATACAAGAAGTCTAAGCAAGGTTAGTTCTTTTACTCTTTATCTACTGGAATTCTGTTGTACCGATCTTTTTTAGTTCCTTATGTTTCACTGTCTCTGATTAAGGTTTAAATTCGAGATCTTAAGTTGTGGGTAAAATTAAGACTTTTTTTTGCTAGTTATGAGATTTACTAGGAGGCAAAATTTTCTTCTTTCGTTCTCGGTGCTTTGTTTTGGTGATTTCGTGTTCTGTTTGCTTACTTATCTTGTTAATTAGCTAGATTACTGCAAAAAGTACTGGCCTTTTTTATCTGATGTAAATCTAAATTGAGTGATGATAGATCAGCTTTAGCTAAGTTGTTACTATTGTTAAATGTTAATTACTGGGTTTTGTTGGTCTCAAGCTTATATCTTCCACTGTCCTTGAGTTTTAGTATTTCTTTACTTTAATCCCTCTTCTCAAATATAAAGCTAATAACAGTTTATAACCATACCAAGGATTTAGTTTTGTTGATTGAATAAGCCTTTTTCCTCTGCAAAGTGTTTTTGTGTCCAGTTGGTTAGTTATCCTGAAAACATTAAAAAACATTATGCATCTTTTGATTTGAAAGTTTCATATAGATGATAAGATGAATGTATGAATGATATGTTGGATTCTAAAAGCAATATATTGAACTTCAGATAAGTTTTTAACTAAAGGAAAACACTTAATGTTTGGAACAGAGATGGAATCATATTCAACTGGTTTAGGAAGCAAATCGAAGCCATGCACAAAATTTTTCAGGTTATAATCCTTTTACTTAATGAATTAATATTCGAATTGTTATCTACCTGCAAGTTTGATCCCGAAATTACCAAGTAATACTAGATGCTAATGAAGTGGTTAGTTGTTATACAGGTATGTAAACATGTTTCAATCTGAATAGATAAGCGTATCTAGTTTGAGAATCATTTAGTTCAACTGGTTGTTATAACATAACAAAATCAACCAAAACATGTATTTTGTTTGAGCTGTGATAGTTGTTCTTCTATTTGGTGGTAGGGTATTAGTGATTTTGGGTTTATAATATAGTTGTTTATGGTCAGGTAAAGTTGTCGCATTACTAGTGGAATTGCCGCGCATCTATAAGCAGAACCGGATTACTATTTTTATTCTCTTATAGCACAATGATCATTGCTGTATCAATATGCTATTTCTTCTGTCTCTATTTGGTTTGTTCTTGTGCTATTCTATTCCCATTGTGTTTAAATCTCTGATGTATTATGCTTCTATTGCAGTACTTCTGGCTGTCCTTTCGGAGAGAATTGCCATTTCTTGCATTATGTTCCCGGAGGATACAATGCTGTATCGCAGATGACAAATATGGGACCACCCATTCCTCAAGTTTCCAGAAACATGCAAGGTTCTGGTAATGGAGGCCGATTCTCAGGGAGGGGAGAGTCTGGGCCTGGCCATGTCTCTAACTTTGGTGACTCAGCCACTGCCAGATTCAGTGTTGATGCCTCTTTAGCCGGTGCAATCATTGGGAAAGGCGGAGTCAGTTCAAAGCAGATATGTCGTCAGACGGGAGTAAAATTATCAATTCAAGATCACGAGAGAGACCCAAACTTGAAGAACATTGTGCTTGAAGGAACACTTGAGCAGATAAGCGAAGCGAGTGCAATGGTAAAAGATTTGATTGGGAGGCTTAATTCAGCAGCTAAGAAACCACCTGGTGGTGGTCTTGGTGGTGGTGGTGGCATGGGTTCTGAAGGGAAACCACATCCAGGGAGCAACTTCAAGACTAAGATATGTGAGAGATTCTCAAAAGGAAACTGTACATTTGGTGATAGATGTCACTTTGCTCATGGGGAAGCAGAGCTACGCAAGTCAGGAATCGTCTAGTTGTTGCTTGCAGATAGAGAATTTGCTGGTAAAACTAGTTTCTTATTTAGTGGTGGTGATATCTGATATCATCTTCACCTACTTTGTTTTTGTTTGTTATGAGAGAATACAATTTTAGTTTCATTATCATTGTAAGTCTATTTGGTGTTTTTTTTAATAGTTTAGTTTTTGGTTAATTCTGAGTATGAATTGAGATGGGAGGAAGCTTGAAGAGAATGATTGACAAAACTCAGAAACAGTGGTTAGGATTGTATGACGCCTTTTATTCATATTCTTGTTATCTCCGTTATGTCATGTGTGTGAATCACTTATATAATTTTCGTAAGATTTTCTG

CDS sequence:

>AT3G12130.1[747 nucleotides] 
ATGGATACTCGTAAGAGAGGACGGCCTGAAGCTGGCTCATTCAACTCCAATGGCGGCGGATACAAGAAGTCTAAGCAAGAGATGGAATCATATTCAACTGGTTTAGGAAGCAAATCGAAGCCATGCACAAAATTTTTCAGTACTTCTGGCTGTCCTTTCGGAGAGAATTGCCATTTCTTGCATTATGTTCCCGGAGGATACAATGCTGTATCGCAGATGACAAATATGGGACCACCCATTCCTCAAGTTTCCAGAAACATGCAAGGTTCTGGTAATGGAGGCCGATTCTCAGGGAGGGGAGAGTCTGGGCCTGGCCATGTCTCTAACTTTGGTGACTCAGCCACTGCCAGATTCAGTGTTGATGCCTCTTTAGCCGGTGCAATCATTGGGAAAGGCGGAGTCAGTTCAAAGCAGATATGTCGTCAGACGGGAGTAAAATTATCAATTCAAGATCACGAGAGAGACCCAAACTTGAAGAACATTGTGCTTGAAGGAACACTTGAGCAGATAAGCGAAGCGAGTGCAATGGTAAAAGATTTGATTGGGAGGCTTAATTCAGCAGCTAAGAAACCACCTGGTGGTGGTCTTGGTGGTGGTGGTGGCATGGGTTCTGAAGGGAAACCACATCCAGGGAGCAACTTCAAGACTAAGATATGTGAGAGATTCTCAAAAGGAAACTGTACATTTGGTGATAGATGTCACTTTGCTCATGGGGAAGCAGAGCTACGCAAGTCAGGAATCGTCTAG

Transcript sequence:

>AT3G12130.1[1271 nucleotides] 
AAGAGGAAAATCTCATCTTTTTCCCTCGACGACAACCACCTTAGGGTTAGGTTTATTTTCTCGCTTATTCTCTCTAACTCTTTTTCCCTATTCCGATTTCGATTTGTCTTCTCCGATTCGCTTTTCCTTTCGCTCTCTAGACTCTAGAGTCAATTTGATTTCTACTCTCGTATCGGATCTATACTTAATCATGGATACTCGTAAGAGAGGACGGCCTGAAGCTGGCTCATTCAACTCCAATGGCGGCGGATACAAGAAGTCTAAGCAAGAGATGGAATCATATTCAACTGGTTTAGGAAGCAAATCGAAGCCATGCACAAAATTTTTCAGTACTTCTGGCTGTCCTTTCGGAGAGAATTGCCATTTCTTGCATTATGTTCCCGGAGGATACAATGCTGTATCGCAGATGACAAATATGGGACCACCCATTCCTCAAGTTTCCAGAAACATGCAAGGTTCTGGTAATGGAGGCCGATTCTCAGGGAGGGGAGAGTCTGGGCCTGGCCATGTCTCTAACTTTGGTGACTCAGCCACTGCCAGATTCAGTGTTGATGCCTCTTTAGCCGGTGCAATCATTGGGAAAGGCGGAGTCAGTTCAAAGCAGATATGTCGTCAGACGGGAGTAAAATTATCAATTCAAGATCACGAGAGAGACCCAAACTTGAAGAACATTGTGCTTGAAGGAACACTTGAGCAGATAAGCGAAGCGAGTGCAATGGTAAAAGATTTGATTGGGAGGCTTAATTCAGCAGCTAAGAAACCACCTGGTGGTGGTCTTGGTGGTGGTGGTGGCATGGGTTCTGAAGGGAAACCACATCCAGGGAGCAACTTCAAGACTAAGATATGTGAGAGATTCTCAAAAGGAAACTGTACATTTGGTGATAGATGTCACTTTGCTCATGGGGAAGCAGAGCTACGCAAGTCAGGAATCGTCTAGTTGTTGCTTGCAGATAGAGAATTTGCTGGTAAAACTAGTTTCTTATTTAGTGGTGGTGATATCTGATATCATCTTCACCTACTTTGTTTTTGTTTGTTATGAGAGAATACAATTTTAGTTTCATTATCATTGTAAGTCTATTTGGTGTTTTTTTTAATAGTTTAGTTTTTGGTTAATTCTGAGTATGAATTGAGATGGGAGGAAGCTTGAAGAGAATGATTGACAAAACTCAGAAACAGTGGTTAGGATTGTATGACGCCTTTTATTCATATTCTTGTTATCTCCGTTATGTCATGTGTGTGAATCACTTATATAATTTTCGTAAGATTTTCTG

Protein sequence:

>AT3G12130.1[249 residues] 
MDTRKRGRPEAGSFNSNGGGYKKSKQEMESYSTGLGSKSKPCTKFFSTSGCPFGENCHFLHYVPGGYNAVSQMTNMGPPIPQVSRNMQGSGNGGRFSGRGESGPGHVSNFGDSATARFSVDASLAGAIIGKGGVSSKQICRQTGVKLSIQDHERDPNLKNIVLEGTLEQISEASAMVKDLIGRLNSAAKKPPGGGLGGGGGMGSEGKPHPGSNFKTKICERFSKGNCTFGDRCHFAHGEAELRKSGIV*

Locus:	AT3G12130
Transcript name:	AT3G12130.1
Protein name:	19660180_peptide
PAC Transcript ID :	19660180
Chromosome:	Chr3
Start position:	3864152
End position:	3866596
Synonyms:
Description:	KH domain-containing protein / zinc finger (CCCH type) family protein
Other transcripts at this locus:
Map Detail Image:

Gene Family	Genes
Amborella trichopoda	scaffold00022.187; scaffold00149.35; scaffold00269.3;
Arabidopsis thaliana	AT5G06770; AT3G12130;
Oryza sativa ssp. japonica	OS04G57010; OS06G41384; OS02G10080;
Oryza sativa ssp. japonica	OL17G00170;
Physcomitrella patens	PP00059G01660; PP00066G01040;
Picea abies	MA_159838g0010; MA_68032g0010; MA_1151g0010; MA_83924g0010; MA_8414656g0010;
Pinus taeda	PITA_000059887-RA; PITA_000014089-RA; PITA_000014090-RA; PITA_000059827-RA; PITA_000005455-RA; PITA_000088084-RA; PITA_000031774-RA; PITA_000005456-RA; PITA_000032900-RA; PITA_000066266-RA; PITA_000087140-RA; PITA_000057922-RA;
Populus trichocarpa	Potri.016G046600; Potri.001G013200; Potri.003G213200; Potri.T111100; Potri.006G191900;
Selaginella moellendorffii	SM00000G10060;
Vitis vinifera	VV06G06800; VV08G09280; VV13G00710;
Zea mays	ZM02G01270; ZM10G25850; ZM04G38270; ZM06G13250; ZM09G15400; ZM01G39120; ZM06G11100;

Primary links

Arabidopsis thaliana gene model AT3G12130.1
18

Primary links

Arabidopsis thaliana gene model AT3G12130.1 18

Arabidopsis thaliana gene model AT3G12130.1
18